Open Science Workshop Schedule

Here's the roadmap for the Open Science workshop:

Day 1 (August 9, 9:00AM - 5:00PM)

9:00AM - 9:30AM: Welcome (Caleb and Pauline)

Registration
Welcome
Introductions
set-up

9:30AM - 10:15AM: Presentations

Presentation by KENET
Refresher on Open Science
Open Science Tools

10:15:00AM - 10:30AM

Tea Break

10:30 - 11:30AM: Commandline (Ouso)

Basic Linux commandline introduction

11:30 - 12:30: Introduction to Markdown (Caleb)

Markdown syntax
markdown editors
Try it yourself (15 minutes)

12:30PM - 1:30PM

LUNCH

1:30PM - 2:00PM: Discussions and Interactions (Pauline)

Time to interact
Form teams

2:00PM - 3:00PM: Introduction to Git and GitHub (Caleb)

Introduction
Setting up GitHub account
GitHub terminologies

3:00PM - 4:00PM: GitHub for Collaboration (Ronald)

Forking a repository
Creating issues and labels
Merging changes
Pull requests

4:00PM - 4:15PM

BREAK

4:15PM - 5:00PM: Hands-on GitHub (Caleb)

Creating a Git repository
Adding changes to stage
Committing changes
Pushing changes to GitHub

5:00PM - 5:30PM

Q&A and Wrap Up for the Day

Day 2 (August 10, 9:30AM - 5:30PM)

9:00AM - 9:30AM

Set up, Q&A

9:30AM - 10:45AM: Rstudio (Kelvin and Caleb)

Reproducible Research in RStudio
Rmarkdown

10:45AM - 11:00AM

BREAK

11:00AM - 12:30PM: Jupyter Notebooks (Ben and Caleb)

Introduction to Jupyter
Jupyter for reproducible research
Jupyter plugins

12:30PM - 1:30PM

LUNCH

1:30PM - 2:30PM: Interactive Sessions

Group discussions and interactions

2:30PM - 3:45PM

Hands-on Group activities

3:45PM - 4:00PM:

BREAK

4:00PM - 5:00 PM: Hackathon

Recap and discussions on possible hackathon projects

5:00PM - 5:30PM

Q&A and Wrap Up